clustertracking

An algorithm to track overlapping features in video images

This package contains Python code for tracking overlapping features in video images, such as present in for example confocal images of colloidal clusters. The code is heavily based on Trackpy.

Dependencies

• numpy
• scipy
• pandas
• trackpy
• pims
• optional: numdifftools

Contents

• API reference

Support

This package was developed in by Casper van der Wel, as part of his PhD thesis work in Daniela Kraft’s group at the Huygens-Kamerlingh-Onnes laboratory, Institute of Physics, Leiden University, The Netherlands. This work was supported by the Netherlands Organisation for Scientific Research (NWO/OCW).